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#ifndef GMX_GMXPREPROCESS_VSITE_PARM_H
#define GMX_GMXPREPROCESS_VSITE_PARM_H

class PreprocessingAtomTypes;
struct gmx_moltype_t;
struct t_atoms;
struct InteractionsOfType;

namespace gmx
{
template<typename>
class ArrayRef;
class MDLogger;
} // namespace gmx

int set_vsites(bool                              bVerbose,
               t_atoms*                          atoms,
               PreprocessingAtomTypes*           atype,
               gmx::ArrayRef<InteractionsOfType> plist,
               const gmx::MDLogger&              logger);
/* set parameters for virtual sites, return number of virtual sites */

void set_vsites_ptype(bool bVerbose, gmx_moltype_t* molt, const gmx::MDLogger& logger);
/* set ptype to VSite for virtual sites */

/*! \brief Clean up the bonded interactions
 *
 * Throw away all obsolete bonds, angles and dihedrals.
 * Throw away all constraints. */
void clean_vsite_bondeds(gmx::ArrayRef<InteractionsOfType> ps,
                         int                               natoms,
                         bool                              bRmVSiteBds,
                         const gmx::MDLogger&              logger);

#endif
